Package: EcoEnsemble
Title: A General Framework for Combining Ecosystem Models
Version: 1.0.5
Authors@R: 
    c(person(given = "Michael A.",
                family = "Spence",
                role = c("aut", "cre"),
                email = "michael.spence@cefas.gov.uk",
                comment = c(ORCID = "0000-0002-3445-7979")),
            person(given = "James A.",
                family = "Martindale",
                role = c("aut"),
                comment = c(ORCID = "0000-0002-1913-5592")),
            person(given = "Michael J.",
                family = "Thomson",
                role = c("aut"),
                comment = c(ORCID = "0000-0003-0284-0129")))
Description: Fit and sample from the ensemble model described in Spence et al (2018): "A general framework for combining ecosystem models"<doi:10.1111/faf.12310>.
License: GPL (>= 3)
Encoding: UTF-8
LazyData: true
RoxygenNote: 7.2.1
Biarch: true
Depends: R (>= 3.5.0)
Imports: methods, Rcpp, matrixcalc, RcppParallel (>= 5.0.1), rstan (>=
        2.26.0), rstantools (>= 2.1.1), dplyr, ggplot2, reshape2,
        tibble, cowplot
LinkingTo: BH (>= 1.66.0), Rcpp, RcppEigen (>= 0.3.3.3.0), RcppParallel
        (>= 5.0.1), rstan (>= 2.26.0), StanHeaders (>= 2.26.0)
SystemRequirements: GNU make
Suggests: rmarkdown, knitr, testthat (>= 3.0.0), mgcv
Config/testthat/edition: 3
VignetteBuilder: knitr
Collate: 'DiscrepancyPrior-IndLTPrior-class.R'
        'DiscrepancyPrior-IndSTPrior-class.R'
        'DiscrepancyPrior-ShaSTPrior-class.R'
        'DiscrepancyPrior-TruthPrior-class.R' 'EcoEnsemble-package.R'
        'EnsemblePrior-class.R' 'EnsembleData-class.R'
        'EnsembleFit-class.R' 'EnsembleSample-class.R'
        'Prior_sampling.R' 'RcppExports.R' 'data.R' 'fit_ensemble.R'
        'generate_simulator_stan_data.R' 'get_stan_outputs.R'
        'plot_functions.R' 'prior_functions.R' 'stanmodels.R'
        'validation_functions.R' 'validation_prior_functions.R'
NeedsCompilation: yes
Packaged: 2023-09-18 11:00:19 UTC; MS23
Author: Michael A. Spence [aut, cre] (<https://orcid.org/0000-0002-3445-7979>),
  James A. Martindale [aut] (<https://orcid.org/0000-0002-1913-5592>),
  Michael J. Thomson [aut] (<https://orcid.org/0000-0003-0284-0129>)
Maintainer: Michael A. Spence <michael.spence@cefas.gov.uk>
Repository: CRAN
Date/Publication: 2023-09-18 11:50:02 UTC
Built: R 4.2.0; aarch64-apple-darwin20; 2023-09-18 14:08:56 UTC; unix
Archs: EcoEnsemble.so.dSYM
