Normalization and Analysis of Rank Abundance Distributions

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Documentation for package ‘RADanalysis’ version 1.0.1

• DESCRIPTION file.
• User guides, package vignettes and other documentation.

Help Pages

gut_nrads	Result of normalization of gut_otu_table with 'max_rank = 400' and 'average_over = 2000'.
gut_otu_table	Abundance table of gut microbiome.
RADanalysis	RADanalysis: A package for normalization of abundance tables to desired number of ranks using MaxRank Normalization method.
RADnormalization	Normalizes an abundance vector to the desired number of ranks.
RADnormalization_matrix	Normalizes an abundance table to the desired number of ranks
representative_point	Computes representative point based on the coordinates of points which are in the same group.
representative_RAD	Computes representative normalized RAD of a group of normalized RADs.