Survival Mediation Analysis of High-Dimensional Proteogenomic Data

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Documentation for package ‘SMAHP’ version 0.0.5

• DESCRIPTION file.
• User guides, package vignettes and other documentation.

Help Pages

example_dat	Example Dataset
get_adjusted_p	A function that returns adjusted p-values
get_coef	A function that extracts coefficients.
get_pairs	A function that returns mediation-exposure matrix
get_raw_p	A function that returns unadjusted p-values
get_sig_pathway	A function that returns significant pathways.
SIS_combo	SIS combo
SMAHP	Main function
StepOne	Penalized mediation and outcome models
StepThree	Post-hoc model
StepTwo	Select M-X pairs via SIS