# Negative Binomial Beta t-Test

## Documentation for package ‘NBBttest’ version 1.0.0

- DESCRIPTION file.
- User guides, package vignettes and other documentation.
- Package NEWS.

## Help Pages

NBBtatest-package | Negative Beta Binormail t-Test Package
annotat | Annotation of genes within which alternative splicing occurs
betaparametab | Estimation of parameters alpha (alpha) and beta (beta) of beta distribution
betaparametVP | Estimation of parameters V and P in count data of RNA reads
betaparametw | Estimation of proportion weights
betattest | Beta t-test
DDX39_100 | DDX39 exon data with 100 exons
exondata | Exon data for NBBplot
gbetattest | Beta t-tests within groups
gtfa | gtf
jkttcell | Jurkat T-cell transcritomic data
mbetattest | Performance of multiple beta t-test on count data
mtpvadjust | Adjust p-values for multiple comparisons
myheatmap | Heatmap
myheatmap2 | Heatmap2
NBBplot | Plot differential expression of exons within a specified gene using result outputed by NBBttest.
NBBtatest | Negative Beta Binormail t-Test Package
normalized | Normalization of data
oddratio | Calculation of zeta (zeta)
omega | Omega calcularion
pathwayHeatmap | Heatmap for pathways found by gene ontology analysis
pathwy.A.up | Pathway or function data
pratio | Calculation of psi (psi )
prime3_PRP8_50 | 3'UTR splicing data of 50 genes detected in the knockdowned PRP8 cell line
QC | Count data quality check
result | Jurkat T-cell transcritomic data with isoforms selected by NBBttest
sgRNA | sgRNA dataset
simSplicing | Simulated alternative splicing
simulat | Simulation
skjt | Simulated Null Transcriptomic data
smbetattest | Performance of multiple beta t-test on simulated data
subdata | Splite data into two subsets
upGAm | Count data of group A treated breast cancer in mice