calcGRM	calcGRM
CalcThreshold	CalcThreshold
cumsumPos	cumsumPos
design.Z	design.Z
EM3.cpp	EM3.cpp
EM3.general	EM3.general
EM3.linker.cpp	EM3.linker.cpp
EM3.op	EM3.op
EMM.cpp	EMM.cpp
EMM1.cpp	EMM1.cpp
EMM2.cpp	EMM2.cpp
estNetwork	estNetwork
estPhylo	estPhylo
genesetmap	genesetmap
genetrait	genetrait
is.diag	is.diag
MAF.cut	MAF.cut
make.full	make.full
manhattan	manhattan
manhattan.plus	manhattan.plus
manhattan2	manhattan2
manhattan3	manhattan3
modify.data	modify.data
parallel.compute	parallel.compute
plotHaploNetwork	plotHaploNetwork
plotPhyloTree	plotPhyloTree
qq	qq
RAINBOWR	RAINBOWR
RGWAS.epistasis	RGWAS.epistasis
RGWAS.menu	RGWAS.menu
RGWAS.multisnp	RGWAS.multisnp
RGWAS.normal	RGWAS.normal
RGWAS.normal.interaction	RGWAS.normal.interaction
RGWAS.twostep	RGWAS.twostep
RGWAS.twostep.epi	RGWAS.twostep.epi
Rice_geno_map	Rice_geno_map
Rice_geno_score	Rice_geno_score
Rice_pheno	Rice_pheno
Rice_Zhao_etal	Rice_Zhao_etal
score.calc	score.calc
score.calc.epistasis.LR	score.calc.epistasis.LR
score.calc.epistasis.LR.MC	score.calc.epistasis.LR.MC
score.calc.epistasis.score	score.calc.epistasis.score
score.calc.epistasis.score.MC	score.calc.epistasis.score.MC
score.calc.int	score.calc.int
score.calc.int.MC	score.calc.int.MC
score.calc.LR	score.calc.LR
score.calc.LR.MC	score.calc.LR.MC
score.calc.MC	score.calc.MC
score.calc.score	score.calc.score
score.calc.score.MC	score.calc.score.MC
score.cpp	score.cpp
score.linker.cpp	score.linker.cpp
See	See
spectralG.cpp	spectralG.cpp
SS_gwas	SS_gwas
welcome_to_RGWAS	welcome_to_RGWAS
